BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003H06LP1|AL425197
(985 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1109 1854 0.0
>3x_Contig1109
Length = 3474
Score = 1854 bits (932), Expect = 0.0
Identities = 975/986 (98%), Gaps = 5/986 (0%)
Strand = Plus / Minus
Query: 1 cttctcaacttcacaaaattgagagggaaattctgcaactaaacctgaagttctgaaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2361 cttctcaacttcacaaaattgagagggaaattctgcaactaaacctgaagttctgaaatg 2302
Query: 61 aaaaaaaaaaaaaaataaaccaaaacagagaccaaaaaaaaggtcaaattcctaagtata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2301 aaaaaaaaaaaaaaataaaccaaaacagagaccaaaaaaaaggtcaaattcctaagtata 2242
Query: 121 tagttggggaaaratggacagttttagaaactatactttgatatctgagattccgtatca 180
|||||||||||| |||||| ||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 2241 tagttggggaaagatggac-gtttt-gaaactatactttgatatctgagtttccgtatca 2184
Query: 181 gttaacctgtgttatagacaccaaatggcccactaaattctccgtctaatgctctaactc 240
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2183 gttaacctgtgttat-gacaccaaatggcccactaaattctccgtctaatgctctaactc 2125
Query: 241 caccaatgaaatatcaaacatggtgattaattgtggttaagttgatttcaatttcaattt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2124 caccaatgaaatatcaaacatggtgattaattgtggttaagttgatttcaatttcaattt 2065
Query: 301 ttggtacaaaaaataawagtgtttcttttttctacgaagagggawagtagaaacttatga 360
|||||||||||||||| |||||||||||||||||||||| |||| |||||||||||||||
Sbjct: 2064 ttggtacaaaaaataatagtgtttcttttttctacgaag-gggatagtagaaacttatga 2006
Query: 361 tcacgtgawatatggtagggtaatttccaaagcatggtttgcagtcacatccacataatg 420
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2005 tcacgtgatatatggtagggtaatttccaaagcatggtttgcagtcacatccacataatg 1946
Query: 421 accgggaacagttggatttatacgtgtatattcagtgcacaacctagtcgcattgtcgtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1945 accgggaacagttggatttatacgtgtatattcagtgcacaacctagtcgcattgtcgtt 1886
Query: 481 ttgatcgctggagaggttgttgtacttggagttcgatcaatttagtacccgtatagtgtg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1885 ttgatcgctggagaggttgttgtacttggagttcgatcaatttagtacccgtatagtgtg 1826
Query: 541 gttagcctgatagcgcagtacatatggaaagaagtgtaacctttttcggattggaaacta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1825 gttagcctgatagcgcagtacatatggaaagaagtgtaacctttttcggattggaaacta 1766
Query: 601 tcaatagagtgtcattcctaagggacgacgaggttttcatcaagcaagcgttcgaacatg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1765 tcaatagagtgtcattcctaagggacgacgaggttttcatcaagcaagcgttcgaacatg 1706
Query: 661 gaagtactcagtttgtaccgtttatcaatggggcagcattcgcaactgagactagtgaca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1705 gaagtactcagtttgtaccgtttatcaatggggcagcattcgcaactgagactagtgaca 1646
Query: 721 agtctggtaccaatttattaatgttaggacatcaaggttgtcctaactactcggaatggc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1645 agtctggtaccaatttattaatgttaggacatcaaggttgtcctaactactcggaatggc 1586
Query: 781 caggcttactaaacaagataagatctgtcatggataccgagagaggatggttagttgaat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1585 caggcttactaaacaagataagatctgtcatggataccgagagaggatggttagttgaat 1526
Query: 841 ccgggttcacaataacgtttttagggttgatggatggtgacagcagtttttcttacaagg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1525 ccgggttcacaataacgtttttagggttgatggatggtgacagcagtttttcttacaagg 1466
Query: 901 agtacaccggtaccccattgtttgccatggatttgcggccagcgtccgatactctagttc 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1465 agtacaccggtaccccattgtttgccatggatttgcggccagcgtccgatactctagttc 1406
Query: 961 aaaagtcggara-aaagttcatacta 985
|||||||||| | |||||||||||||
Sbjct: 1405 aaaagtcggagacaaagttcatacta 1380
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 16,635
Number of Sequences: 1807
Number of extensions: 16635
Number of successful extensions: 2361
Number of sequences better than 1.0e-20: 1
length of query: 985
length of database: 10,358,551
effective HSP length: 16
effective length of query: 969
effective length of database: 10,329,639
effective search space: 10009420191
effective search space used: 10009420191
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)